PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco017007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 422aa    MW: 45970.3 Da    PI: 5.3475
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco017007.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.5e-31208266259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp+++++tY++eHnh+
  Aco017007.1 208 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVVTYTSEHNHP 266
                  699************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.948202268IPR003657WRKY domain
SuperFamilySSF1182902.75E-26206268IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-30206268IPR003657WRKY domain
SMARTSM007741.8E-37207267IPR003657WRKY domain
PfamPF031067.1E-26209266IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MCDYFWERME KEQGGDLADI VRAGGRGVIG SDIPMPDIAA AWQHLPSSSD PTAFPAPVSD  60
DFGNPFINSR DPLFDGFADS MAGGRQLAGE VALTVGEELK QQQQQPPCNN NSNSNSNNSS  120
SSSSIFSRVV QISPPRPIKP SPVMAEVDAM AGVQISSPRN PGIKRRFVFV LYYGCRKSQA  180
KKVVCIPAPA AAAGGGGGGR PGGEVVPSDL WAWRKYGQKP IKGSPYPRGY YRCSSSKGCS  240
ARKQVERSRT DPNMLVVTYT SEHNHPWPTQ RNALAGSTRS QPLKNSSSAS KSSLQSQKAQ  300
QITTVKEEPM NKETASVKNI SPIVKEEAHE MEKAMDVADQ DSELHHQLFH QSYKPMIPES  360
GQPDDFFADL AELESDPMSL IFSKELMETK GDEERGDEAL DDAFNMFEWE GDSFGEAKKG  420
L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-172062681374WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008788702.11e-151PREDICTED: probable WRKY transcription factor 14
TrEMBLA0A0D9W8W91e-110A0A0D9W8W9_9ORYZ; Uncharacterized protein
STRINGOB04G30700.11e-108(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.14e-66WRKY DNA-binding protein 14